default.tables: Model input tables

Description Usage Format

Description

List of data frames being input tables of the SBW model

Usage

1

Format

A list with 6 elements:

post.sbw.reg: A data frame of species regeneration probability after mortality by SBW defoliation
  • spp: Code of the species.

  • potential.spp: Code of the species to change.

  • ptrans: Probability of transition.

forest.succ: A data frame of transition probability of species seral succession
  • spp: Code of the species.

  • potential.spp: Code of the species to change.

  • ptrans: Probability of transition.

spp.colonize.persist: A data frame of species seral succession
  • spp: Code of the species.

  • rad: Estimated maximum colonization distance (in m).

  • nneigh: Minimum number of source cells within the colonization distance to enable colonization.

  • persist:It indicates whether we allow the transition probability to remain high locally.

temp.suitability: A data frame with thresholds of temperature to define optimal and good species niche
  • spp: Code of the species.

  • th1: Temperature lower threshold to define 'good' species niche (in ºC).

  • th2: Temperature lower threshold to define 'optimal' species niche (in ºC).

  • th3: Temperature upper threshold to define 'good' species niche (in ºC).

  • th4: Temperature upper threshold to define 'optimal' species niche (in ºC).

prec.suitability: A data frame with thresholds of precipitation to define optimal and good species niche
  • spp: Code of the species.

  • th1: Precipitation lower threshold to define 'good' species niche (in mm).

  • th2: Precipitation lower threshold to define 'optimal' species niche(in mm).

  • th3: Precipitation upper threshold to define 'good' species niche (in mm).

  • th4: Precipitation upper threshold to define 'optimal' species niche (in mm).

soil.suitability: A data frame with thresholds of precipitation to define optimal and good species niche
  • spp: Code of the species.

  • thT: Species suitability in glacial tills [0,1].

  • thO: Species suitability in organic deposists [0,1].

  • thR: Species suitability in rock outcrops or very thin deposits [0,1].

  • thS: Species suitability in sandy deposists [0,1].

  • thA: Species suitability in clay deposits [0,1].


nuaquilue/SBW documentation built on Jan. 2, 2022, 7:19 p.m.