applyThreshold: Apply threshold
In nucleosome-dynamics/NucDyn: Nucleosome Dynamics
Description
Usage
Arguments
Value
Author(s)
Description
Apply an indel threshold and a shift threshold to the hotspots
Usage
1
applyThreshold(hs, indel.thresh, shift.thresh, indel.nreads, shift.nreads)
Arguments
hs
Hotspots returned by findHotspots.
indel.thresh
threshold for the indels.
shift.thresh
threshold for the shifts.
indel.nreads
minimum number of reads for the indels.
shift.nreads
minimum number of reads for the shifts.
Value
a hotspots data.frame filered by the thresholds.
Author(s)
Ricard Illa,
Diana Buitrago diana.buitrago@irbbarcelona.org
nucleosome-dynamics/NucDyn documentation built on July 10, 2019, 10:54 a.m.
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Description Usage Arguments Value Author(s)
Description
Apply an indel threshold and a shift threshold to the hotspots
Usage
1 | applyThreshold(hs, indel.thresh, shift.thresh, indel.nreads, shift.nreads)
|
Arguments
hs |
Hotspots returned by findHotspots. |
indel.thresh |
threshold for the indels. |
shift.thresh |
threshold for the shifts. |
indel.nreads |
minimum number of reads for the indels. |
shift.nreads |
minimum number of reads for the shifts. |
Value
a hotspots data.frame filered by the thresholds.
Author(s)
Ricard Illa, Diana Buitrago diana.buitrago@irbbarcelona.org
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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