fracwild_multipanel: Figure of the raw and smoothed fracwild estimates.
In nwfsc-math-bio/NWCTrends: Standardized Trend Metrics for Salmonid Populations

View source: R/fracwild_plot_multipanel.R

fracwild_multipanel

R Documentation

Figure of the raw and smoothed fracwild estimates.

Description

This is the fracwild figure function. Not exported. It is used by NWCTrends_report and inst/doc/report_files/esu_report.Rmd.

The dots are the raw fracwild values, the black line is the smoothed fracwild estimate. For the smoothed fracwild estimates, there is no data sharing across populations.

Usage

fracwild_multipanel(
  esu,
  pops,
  fracwild.fit,
  min.year = NULL,
  max.year = NULL,
  show.all = TRUE,
  nwctrends.options = NULL
)

Arguments

`esu`	The name of the ESU
`pops`	The population names that will be plotted (populations with too few data are eliminated)
`fracwild.fit`	fracwild fit returned by `trend_fits()`
`min.year`	The x axis minimum.
`max.year`	The x axis maximum.
`show.all`	If there is no fracwild data for a population, should that population still have a fracwild plot, which will be blank.
`nwctrends.options`	A list of plot options to change the appearance (colors, line types, line widths, point types, etc) in the plots. See `nwctrends.options` for a description of the options. Note, if `risk_plot_multipanel()` is called from `NWCTrends_report()` then `nwctrends.options` has already been set and can be left at `NULL` in this call.