dot-subsetMetagene: Subset metagene matrices
In nzhang89/RiboSeeker: A Package for Ribosome Profiling Data Analysis and Visualization
.subsetMetagene R Documentation
Subset metagene matrices
Description
Keep transcripts with the highest expression in coding start and end regions.
Usage
.subsetMetagene(metagene, nTx)
Arguments
metagene
A list of two matrices representing read counts in CDS start and end
regions. Each row is a transcript, each column is a position, and value represents read
counts in a transcript at a position.
nTx
A numeric variable of the number of transcripts to keep.
Value
A filtered list of two matrices where the highest expressed transcripts (in coding
start and end regions) are kept.
nzhang89/RiboSeeker documentation built on April 15, 2022, 10:18 a.m.
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| .subsetMetagene | R Documentation |
Subset metagene matrices
Description
Keep transcripts with the highest expression in coding start and end regions.
Usage
.subsetMetagene(metagene, nTx)
Arguments
metagene |
A list of two matrices representing read counts in CDS start and end regions. Each row is a transcript, each column is a position, and value represents read counts in a transcript at a position. |
nTx |
A numeric variable of the number of transcripts to keep. |
Value
A filtered list of two matrices where the highest expressed transcripts (in coding start and end regions) are kept.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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