resolve_single_id: Resolves missing external IDs belonging to a single...
In oboforty/metafetcher: An R package for linking and standardizing metabolites data
Description
Usage
Arguments
Value
Examples
Description
Resolves missing external IDs belonging to a single metabolome ID
Usage
1
resolve_single_id(start_db_tag, start_db_id)
Arguments
start_db_tag
The type of the ID - which database it belongs to? All lowercase and must end in '_id'
start_db_id
The metabolome ID in the given database
Value
A list containing some statistics and a dataframe, that contains a single row with the resolved data.
Examples
1
2
3
4
# For example to start the search from https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:8077
resp <- resolve_single_id("chebi_id", "8077")
df.out <- resp$df
view(df.out)
oboforty/metafetcher documentation built on Aug. 18, 2021, 6:38 a.m.
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Description Usage Arguments Value Examples
Description
Resolves missing external IDs belonging to a single metabolome ID
Usage
1 | resolve_single_id(start_db_tag, start_db_id)
|
Arguments
start_db_tag |
The type of the ID - which database it belongs to? All lowercase and must end in '_id' |
start_db_id |
The metabolome ID in the given database |
Value
A list containing some statistics and a dataframe, that contains a single row with the resolved data.
Examples
1 2 3 4 | # For example to start the search from https://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:8077
resp <- resolve_single_id("chebi_id", "8077")
df.out <- resp$df
view(df.out)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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