git_prov_funs: Register functions to enable git provenance tracking

In oharac/provRmd: Track Provenance Within R Markdown scripts

Description

Utility functions to assist working with git_prov. Each of these reassigns the original function to a new function in the provRmd namespace. The new function just adds an automatic call to git_prov() when appropriate.

Usage

source(source_fn, ..., nogit = FALSE, not_tracked = FALSE)

read.csv(file, stringsAsFactors = FALSE, nogit = FALSE,
  not_tracked = FALSE, ...)

write.csv(x, file, row.names = FALSE, nogit = FALSE,
  not_tracked = FALSE, ...)

read_csv(file, nogit = FALSE, not_tracked = FALSE, ...)

write_csv(x, path, nogit = FALSE, not_tracked = FALSE, ...)

readOGR(dsn, layer, stringsAsFactors = FALSE, nogit = FALSE,
  not_tracked = FALSE, ...)

writeOGR(obj, dsn, layer, driver = "ESRI Shapefile", nogit = FALSE,
  not_tracked = FALSE, ...)

readShapePoly(fn, nogit = FALSE, not_tracked = FALSE, ...)

writePolyShape(x, fn, nogit = FALSE, not_tracked = FALSE, ...)

raster(x, nogit = FALSE, not_tracked = FALSE, ...)

brick(x, nogit = FALSE, not_tracked = FALSE, ...)

stack(x, nogit = FALSE, not_tracked = FALSE, ...)

writeRaster(x, filename, bylayer = FALSE, nogit = FALSE,
  not_tracked = FALSE, ...)

gdal_rasterize(src_datasource, dst_filename, ..., nogit = FALSE,
  not_tracked = FALSE)

rasterize(x, y, filename = "", nogit = FALSE, not_tracked = FALSE,
  ...)

ggsave(filename, ..., nogit = FALSE, not_tracked = FALSE)

Details

To override these functions, use the double-colon notation (e.g. utils::write.csv() or readr::read_csv()) to call the function directly from the original package; alternately, add an argument of nogit = TRUE to suppress the git_prov() call.

oharac/provRmd documentation built on June 25, 2019, 9:06 p.m.