MakePointsPolygonStack: Function to create stack for small presence/absence polygons

In oharar/PointedSDMs: Fit Models derived from Point Processes to Species Distributions using INLA

Function to create stack for small presence/absence polygons

Description

Function to create stack for small presence/absence polygons

Usage

MakePointsPolygonStack(polys, data, coords = c("X", "Y"), mesh,
  polydatanames = NULL, respName = "Present", tol = 0.1,
  tag = "polygon", InclCoords = FALSE)

Arguments

polys	Spatial polygon data frame.
data	Data frame with columns for coordinates, and others are covariates.
coords	Names for columns with coordinates in data.
mesh	INLA mesh.
polydatanames	Names of covariate data in polygon object. Defaults to NULL, which means no covariate data at polygon level.
respName	Name for response (e.g. presence/absence). Might be possible to use >1, but haven't tried.
tol	Tolerance for converting points to spatial pixels.
tag	Name for tag for the stack (defaults to "points").
InclCoords	Boolean, should coordinates be included in data (defaults to FALSE).

Value

An INLA stack, which will be treated as points in the analysis.

oharar/PointedSDMs documentation built on July 11, 2022, 11:20 a.m.