Files in ohdsi-studies/Covid19SusceptibilityAlphaBlockers
A Package Skeleton for Comparative Effectiveness Studies
.Rbuildignore
.Rprofile
.gitignore
Covid19SusceptibilityAlphaBlockers.Rproj
DESCRIPTION
Documents/Appendix_2_ENCePP_Checklist_ver_1_0.pdf
Documents/alpha_blocker_study_protocol.pdf
Documents/alpha_blocker_study_supplementary_result.pdf
HydraConfig.json
NAMESPACE
R/CalibrateMetaAnalyze.R
R/CohortMethod.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/Diagnostics.R
R/Export.R
R/IntermediateResults.R
R/Main.R
R/Package.R
R/ShinyApps.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
README.md
extras/.gitignore
extras/BalanceFig.tex
extras/CodeToRun.R
extras/CombinedDemographics.csv
extras/CreateAnalysis.R
extras/CreateNegativeControls.R
extras/EmpiricalCalibrationPlot.Rmd
extras/PackageMaintenance.R
extras/ReducedDemographics.csv
extras/ReducedDemographicsWoRace.csv
extras/ReducedTableBottom.tex
extras/ReducedTableTop.tex
extras/Results.Rmd
extras/Results_preamble.txt
extras/SupTabEffectBottom.tex
extras/SupTabEffectMaTop.tex
extras/SupTabEffectTop.tex
extras/Supplement.Rmd
extras/Table1BottomSup.tex
extras/Table1BottomTriple.tex
extras/Table1Botton.tex
extras/Table1BottonDouble.tex
extras/Table1Top.tex
extras/Table1TopDouble.tex
extras/Table1TopSup.tex
extras/Table1TopTriple.tex
extras/Table2TopTriple.tex
extras/calibrate_and_meta_analyze.R
extras/extract_tables.py
extras/mas_fun.sty
extras/rename_json_and_sql.R
extras/replace_package_names.sh
extras/tex_table_to_png.sh
inst/cohorts/Cohort_Atlas_ID_1103.json
inst/cohorts/Cohort_Atlas_ID_1104.json
inst/cohorts/Cohort_Atlas_ID_1200.json
inst/cohorts/Cohort_Atlas_ID_1201.json
inst/cohorts/Cohort_Atlas_ID_972.json
inst/cohorts/Cohort_Atlas_ID_974.json
inst/cohorts/Cohort_Atlas_ID_981.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R
inst/shiny/EvidenceExplorer/server.R
inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/Cohort_Atlas_ID_1103.sql
inst/sql/sql_server/Cohort_Atlas_ID_1104.sql
inst/sql/sql_server/Cohort_Atlas_ID_1200.sql
inst/sql/sql_server/Cohort_Atlas_ID_1201.sql
inst/sql/sql_server/Cohort_Atlas_ID_972.sql
inst/sql/sql_server/Cohort_Atlas_ID_974.sql
inst/sql/sql_server/Cohort_Atlas_ID_981.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
man/Covid19SusceptibilityAlphaBlockers.Rd
man/createCohorts.Rd
man/execute.Rd
man/exportResults.Rd
man/generateDiagnostics.Rd
man/launchEvidenceExplorer.Rd
man/prepareForEvidenceExplorer.Rd
man/runCohortMethod.Rd
man/synthesizePositiveControls.Rd
man/uploadResults.Rd
study_package_readme.md
