Man pages for onertipaday/pyCOMPASSR
API to 'Python' Library 'pyCOMPASS'
| add_module | Add biological feature to the module |
| create_module | Create a new module |
| create_module_bf | Create a new module providing biological featurers (genes) |
| create_module_ss | Create a new module providing Sample sets |
| get_bf | Get biological feature |
| get_compendium | Get a compendium by a given name, None otherwise |
| get_data_sources | Get the experiments data sources both local and public |
| get_platform_types | Get the platform types |
| get_ss | Get sample set |
| join_modules | Create a new module joining two modules |
| plot_distribution | Get the HTML or JSON code that plot module distributions |
| plot_heatmap | Get the HTML or JSON code that plot module heatmaps |
| plot_network | Get the HTML or JSON code that plot the module networks |
| rank_genes | Rank all biological features on the module’s sample set using... |
