plot.ResponseSurface: Method for plotting response surface objects

In openanalytics/BIGL: Biochemically Intuitive Generalized Loewe Model

Method for plotting response surface objects

Description

Method for plotting response surface objects

Usage

## S3 method for class 'ResponseSurface'
plot(x, color = c("z-score", "maxR", "occupancy", "effect-size"), ...)

Arguments

x	Output of fitSurface
color	Character indicating on what values surface coloring will be based. If color = "z-score", surface coloring will be based on median of standartized off-axis Z-scores. Median function can be replaced by other function using an optional colorfun argument which will be passed to plotResponseSurface. Color breaks are determined here by standard deviation of off-axis Z-scores. For color = "maxR", coloring will be based on values of maxR statistic and the quantile of its distribution (bootstrapped or not). If color = "occupancy", coloring will be based on calculated occupancy rate for the respective dose combination. If color = "effect-size", coloring will be based on effect size for the respective dose combination.
...	Further parameters passed to plotResponseSurface. colorBy argument in this method is computed automatically and thus cannot be passed to plotResponseSurface.

openanalytics/BIGL documentation built on July 7, 2023, 7:49 a.m.