get_pat_pool_config: Configure study patient pool by site parameters.

In openpharma/simaerep: Find Clinical Trial Sites Under-Reporting Adverse Events

Configure study patient pool by site parameters.

Description

Internal Function used by sim_sites()

Usage

get_pat_pool_config(df_visit, df_site, min_n_pat_with_med75 = 1)

Arguments

df_visit	dataframe
df_site	dataframe as created by site_aggr()
min_n_pat_with_med75	minimum number of patients with visit_med_75 for simulation, Default: 1

Details

For simulating a study we need to configure the study patient pool to match the configuration of the sites

Value

dataframe

Examples

df_visit1 <- sim_test_data_study(n_pat = 100, n_sites = 5,
                                      frac_site_with_ur = 0.4, ur_rate = 0.6)

df_visit1$study_id <- "A"

df_visit2 <- sim_test_data_study(n_pat = 1000, n_sites = 3,
                                      frac_site_with_ur = 0.2, ur_rate = 0.1)

df_visit2$study_id <- "B"

df_visit <- dplyr::bind_rows(df_visit1, df_visit2)

df_site <- site_aggr(df_visit)

df_config <- get_pat_pool_config(df_visit, df_site)

df_config

openpharma/simaerep documentation built on Feb. 2, 2025, 12:04 a.m.