preprocess_ge_meta: preprocess_ge_meta
In oriolarques/GEGVIC: A workflow to analyse Gene Expression, Genetic Variations and Immune cell Composition of tumour samples using Next Generation Sequencing data.
View source: R/ge_data_preprocess.R
preprocess_ge_meta R Documentation
preprocess_ge_meta
Description
Prepares metadata file for posterior analysis using DESeq2.
Usage
preprocess_ge_meta(metadata, counts = NULL)
Arguments
metadata
Data frame that contains supporting variables to the data.
counts
Data frame that contains gene expression data as raw counts.
Value
Generates a data frame.
Examples
metadata <- preprocess_ge_meta(metadata = sample_metadata,
counts = sample_counts[,-1])
oriolarques/GEGVIC documentation built on Oct. 30, 2024, 10:44 p.m.
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View source: R/ge_data_preprocess.R
| preprocess_ge_meta | R Documentation |
preprocess_ge_meta
Description
Prepares metadata file for posterior analysis using DESeq2.
Usage
preprocess_ge_meta(metadata, counts = NULL)
Arguments
metadata |
Data frame that contains supporting variables to the data. |
counts |
Data frame that contains gene expression data as raw counts. |
Value
Generates a data frame.
Examples
metadata <- preprocess_ge_meta(metadata = sample_metadata,
counts = sample_counts[,-1])
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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