insert_bugfile_chunk_reg_nonest_meas: Insert measurement likelihood (with regression) code chunks...

In oslerinhealth-releases/baker: Bayesian Analysis Kit for Etiology Research

Description

Insert measurement likelihood (with regression) code chunks into .bug model file

Usage

insert_bugfile_chunk_reg_nonest_meas(Mobs, prior, cause_list, FPR_formula,
  use_measurements = "BrS", ppd = NULL, use_jags = FALSE)

Arguments

Mobs	Measurement data in the form of data_nplcm
prior	Prior specification from model_options
cause_list	A list of latent status names (crucial for building templates; see make_template)
FPR_formula	A list of FPR regression formula; check model_options$likelihood$FPR_formula
use_measurements	"BrS", or "SS"
ppd	Default is NULL; set to TRUE for posterior predictive checking
use_jags	Default is FALSE; set to TRUE if want to use JAGS for model fitting.

Value

A long character string to be inserted into .bug model file as measurement likelihood

See Also

It is used in write_model_Reg_NoNest for constructing a .bug file along with specification of latent status regression (insert_bugfile_chunk_reg_etiology)

oslerinhealth-releases/baker documentation built on Nov. 4, 2019, 11:11 p.m.