scale_fluidigm: Scale Normalized Fluidigm data

Description Usage Arguments Details

Description

Add these two column to a fluidigm dataset:

Usage

1
scale_fluidigm(.data, .group)

Arguments

.data

A 'data.frame' produced by 'read_fluidigm()' and normalized by 'normalize()'. The columns required are: 'sample_name','target_name' and 'expression'.

.group

A column of '.data' that you want to use to group your expression values before scaling.

Details

- 'scaled_sd' is a column that stores expression values scaled by z-scored. - 'scaled_01' is a column that stores expression values scaled in range from 0 to 1.

Run this function after 'normalize()'.


othomantegazza/fluidigr documentation built on May 25, 2019, 2:21 p.m.