decode_qualities: Title

Description Usage Arguments Value Examples

View source: R/decode_qualities.R

Description

Title

Usage

1
decode_qualities(qualities, offset = 33)

Arguments

qualities

String of sequence Qualities from a fastq format file

offset

Scalar number which is either 33 or 64, the only two offsets used in fastq files. Default value is 33

Value

Vector of phred scores for each character of the sequence qualities, values cannot be < 0

Examples

1
decode_qualities("???#;ABAAAH")

ottomagnusson/fastqR documentation built on Dec. 22, 2021, 5:20 a.m.