init_movement_mat: Initialize the movement model matrix. An alternative function...

In pacific-hake/pacifichakemse: Management Strategy Evaluation of Pacific Hake

Initialize the movement model matrix. An alternative function should be written if changes are required to the initialization assumptions

Description

Initialize the movement model matrix. An alternative function should be written if changes are required to the initialization assumptions

Usage

init_movement_mat(
  n_space = NULL,
  space_names = NULL,
  n_season = NULL,
  season_names = NULL,
  m_yr = NULL,
  n_yr = NULL,
  yrs = NULL,
  move_max = NULL,
  move_slope = NULL,
  move_fifty = NULL,
  move_south = NULL,
  move_out = NULL,
  move_init = NULL,
  ages_no_move = NULL,
  ages = NULL,
  age_names = NULL,
  f_space = NULL
)

Arguments

n_space	See load_data_om()
space_names	See load_data_om()
n_season	See load_data_om()
season_names	See load_data_om()
m_yr	The last non-future year. Used to de-populate future values if populate_future is FALSE
n_yr	The number of years in the array dimension
yrs	A vector of names for the years. Length must equal n_yr
move_max	A vector of the maximum movement rate, one for each of n_seasons
move_slope	See load_data_om()
move_fifty	Age at 50 percent movement rate
move_south	See load_data_om()
move_out	See load_data_om()
move_init	See load_data_om()
ages_no_move	See load_data_om()
ages	See load_data_om()
age_names	See load_data_om()
f_space	See load_data_om()

Value

A list of 3 elements: The move_mat matrix for movement, the move_init vector of length n_space and the f_space vector of length n_space

pacific-hake/pacifichakemse documentation built on June 11, 2024, 4:07 a.m.