genePrioritization-package: genePrioritization - Find potential disease-related genes
In palenic/genePrioritization: Find Potential Disease-Related Genes
Description
The genePrioritization package finds potential disease-related genes
based on their coexpression with known disease-related "seed" genes,
starting from
a gene expression count matrix. The package computes a ranked co-expression
list for each seed gene; each candidate gene is assigned the product of its
ranks within these lists as a total score, according to which the candidates
are finally ranked. Higher ranked genes should be functionally linked to the
disease related genes and can thus have a role in the disease.
Details
Package: genePrioritization
Type: Package
Version: 0.99.4
Date: 2020-08-26
License: GPL-3
Author(s)
Chiara Paleni [aut, cre]
Politecnico di Milano
Maintainer: Chiara Paleni
E-Mail: <chiara.paleni@mail.polimi.it>
palenic/genePrioritization documentation built on Sept. 13, 2020, 12:16 a.m.
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Description
The genePrioritization package finds potential disease-related genes
based on their coexpression with known disease-related "seed" genes,
starting from
a gene expression count matrix. The package computes a ranked co-expression
list for each seed gene; each candidate gene is assigned the product of its
ranks within these lists as a total score, according to which the candidates
are finally ranked. Higher ranked genes should be functionally linked to the
disease related genes and can thus have a role in the disease.
Details
| Package: | genePrioritization |
| Type: | Package |
| Version: | 0.99.4 |
| Date: | 2020-08-26 |
| License: | GPL-3 |
Author(s)
Chiara Paleni [aut, cre]
Politecnico di Milano
Maintainer: Chiara Paleni
E-Mail: <chiara.paleni@mail.polimi.it>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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