paulyLin/MPFE: Estimation of the amplicon methylation pattern distribution from bisulphite sequencing data

Estimate distribution of methylation patterns from a table of counts from a bisulphite sequencing experiment given a non-conversion rate and read error rate.

Getting started

Package details

AuthorPeijie Lin, Sylvain Foret, Conrad Burden
Bioconductor views DNAMethylation HighThroughputSequencingData MethylSeq
MaintainerConrad Burden <conrad.burden@anu.edu.au>
LicenseGPL (>= 3)
Version1.5.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("paulyLin/MPFE")
paulyLin/MPFE documentation built on May 24, 2019, 10:34 p.m.