plotRelease: Plot releases according the given method.

In pavel-fibich/TRADER: Tree Ring Analysis of Disturbance Events in R

Plot releases according the given method.

Description

Plot releases according the given method.

Usage

plotRelease(data, abs, rel, treeno = 1, method = "FraverWhite", 
  type = "l", xlab = NULL, ylab = NULL, main = NULL, 
  col = c("black", "lightblue"), 
  addHLinesCol = c("olivedrab", "red", "darkblue"), 
  addHLines = c(NULL, NULL, NULL), addHLinesText = c("", "", ""), 
  smallcex = 0.85, plotfirst = TRUE, plotpoints = FALSE, 
  store=TRUE, storedev=pdf, prefix=NULL, ...)

Arguments

data	A data.frame with series as columns and years as rows such as that produced by read.* function of dplR .
abs	Data frame with absolute increases.
rel	Data frame with releases.
treeno	Number of tree to plot.
method	Which method was used for releases.
type	type of plots (parameter type for plot).
xlab	Label of x-axis.
ylab	Label of y-axis.
main	Title of the figure.
col	List of colors for curves.
addHLinesCol	List of colors for horizontal lines.
addHLines	List values for horizontal lines.
addHLinesText	List texts for horizontal lines.
smallcex	cex for text.
plotfirst	If to plot first year of growth.
plotpoints	If to plot points on the top of releases.
store	If to save results on files.
storedev	Format for saving the graphical outputs, eg. pdf or jpeg.
prefix	Prefix of saved files.
...	Further arguments pasted to plot function.

Details

Complex plotting function of releases.

Value

Plot releases for given tree (treeno).

Note

Check the reference.

Author(s)

Pavel Fibich <[e-mail]>, Jan Altman <[e-mail]>, Tuomas Aakala <[e-mail]>, Jiri Dolezal <[e-mail]>

References

Altman J, Fibich P, Dolezal J & Aakala T (2014) TRADER: a package for Tree Ring Analysis of Disturbance Events in R. Dendrochonologia 32: 107-112.

See Also

absoluteIncreaseALL, growthAveragingALL, boundaryLineALL, splechtnaALL

Examples

data(relData)
rna<-noblabrams(relData1,black=FALSE) # for Nowacki and Abrams 1997
rba<-noblabrams(relData1,black=TRUE) # Black and Abrams 2003

plotRelease(relData1,rna$change,rna, 1, method="NowackiAbrams")
plotRelease(relData1,rba$change,rba, 1, method="BlackAbrams",addHLines=c(0.2,0.5))

pavel-fibich/TRADER documentation built on Feb. 12, 2024, 1:27 a.m.