plot_catch_fit_mcmc: Plot catch fit against catch data

In pbs-assess/gfiscamutils: Provide functions for iSCAM models

Plot catch fit against catch data

Description

Plot catch fit against catch data

Usage

plot_catch_fit_mcmc(
  model,
  append_base_txt = "",
  xlim = NULL,
  ylim = NULL,
  leg_loc = c(0.95, 0.95),
  angle_x_labels = FALSE,
  probs = c(0.025, 0.5, 0.975)
)

Arguments

model	An iscam model object (mdl_cls)
append_base_txt	A vector of strings to append to the model names for display on the plot legend or title
xlim	The x limits for the plot. If NULL, the limits of the data will be used
ylim	The y limits for the plot. If NULL, the limits of the data will be used
leg_loc	A two-element vector describing the X-Y values between 0 and 1 to anchor the legend to. eg. c(1, 1) is the top right corner and c(0, 0) is the bottom left corner
angle_x_labels	If TRUE put 45 degree angle on x-axis tick labels
probs	A 3-element vector of probabilities that appear in the output data frames. This is provided in case the data frames have more than three different quantile levels

See Also

Other Time series plotting functions: plot_biomass_grid_mcmc(), plot_biomass_mcmc(), plot_biomass_mpd(), plot_biomass_proj_mcmc(), plot_f_mcmc(), plot_index_mcmc(), plot_index_mpd(), plot_q_mcmc(), plot_rdevs_mcmc(), plot_recr_grid_mcmc(), plot_recr_mcmc(), plot_recr_mpd(), plot_ts_mcmc(), plot_vuln_mcmc()

pbs-assess/gfiscamutils documentation built on Oct. 24, 2024, 1:37 p.m.