plot_MSSI: Function to visualize the MSSI along a trajectory

In pennekampster/MSSI: The multiscale straightness index for the analysis of animal trajectories

Description

Takes the dataframe returned by the calculate_MSSI function and the raw trajectory data to construct the plot

Usage

plot_MSSI(raw_traj, data, uniqueID = "traj", time = "frame",
  granulosity_choosen = 1, random = T, N_traj = 10,
  trajectory_select = select_traj)

Arguments

raw_traj	A dataframe containing the X and Y coordinates of the trajectories on which the MSSI was calculated
data	The dataframe returned by the calculate MSSI_function containing the MSSI index for each fix and different window sizes and granulosities
uniqueID	Column name of the unique identifier for each trajectory in the dataframe
time	Column name containing the information on the time for each fix
granulosity_choosen	A numeric value of granulosity for plotting corresponding to the granulosity values choosen
random	Logical; whether the trajectories to be plotted are randomly sampled from the data
N_traj	A numeric value specifying the number of trajectories to be plotted
trajectory_select	Vector containing the unique IDs of the trajectories to be plotted

Value

A plot showing the MSSI for each fix for different window sizes

pennekampster/MSSI documentation built on May 25, 2019, 12:46 a.m.