An R and ImageJ based work flow to automatically measure behaviour and morphology from videos. Moving individuals are identified by background subtraction, morphology extracted, and trajectories assembled through time from coordinate data. Abundance, morphology and behaviour can be summarized based on trajectory data.
Package details |
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Author | Frank Pennekamp <Frank.Pennekamp@ieu.uzh.ch>, Owen Petchey <Owen.Petchey@ieu.uzh.ch> |
Maintainer | Frank Pennekamp <Frank.Pennekamp@ieu.uzh.ch> |
License | CC BY-NC 4.0 |
Version | 1.0 |
Package repository | View on GitHub |
Installation |
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