pennekampster/bemovi: BEMOVI, software for extracting BEhaviour and MOrphology from VIdeos

An R and ImageJ based work flow to automatically measure behaviour and morphology from videos. Moving individuals are identified by background subtraction, morphology extracted, and trajectories assembled through time from coordinate data. Abundance, morphology and behaviour can be summarized based on trajectory data.

Getting started

Package details

AuthorFrank Pennekamp <[email protected]>, Owen Petchey <[email protected]>
MaintainerFrank Pennekamp <[email protected]>
LicenseCC BY-NC 4.0
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("pennekampster/bemovi")
pennekampster/bemovi documentation built on July 13, 2017, 7:24 p.m.