plot_results: Plots thermal gradient temperature for each Petri dish

In pgomba/thermgRad: Tools to Visualize and Analyze Germination in Temperature Gradient Plates

Plots thermal gradient temperature for each Petri dish

Description

Similar to tempgrad(), this function outputs a plot representing average temperature or temperature fluctuation for each petri dish

Usage

plot_results(
  x = "Template with cumulative germination data",
  dayBL = "Diurnal bottom left temperature",
  dayBR = "Diurnal bottom right temperature",
  dayTL = "Diurnal top left temperature",
  dayTR = "Diurnal top right temperature",
  nightBL = "Nocturnal bottom left temperature",
  nightBR = "Nocturnal bottom right temperature",
  nightTL = "Nocturnal top left temperature",
  nightTR = "Nocturnal top right temperature",
  petri = "Number of petri in a column or row",
  method = "average corners temperature or use these independently",
  adjust = "adjust temperature to center of Petri dish",
  toplot = "show average temperature or temperature fluctuation"
)

Arguments

x	germination data template
dayBL	Average diurnal temperature at the bottom left side of the thermal gradient plate
dayBR	Average diurnal temperature at the bottom left side of the thermal gradient plate
dayTL	Average diurnal temperature at the bottom left side of the thermal gradient plate
dayTR	Average diurnal temperature at the bottom left side of the thermal gradient plate
nightBL	Average diurnal temperature at the bottom left side of the thermal gradient plate
nightBR	Average diurnal temperature at the bottom left side of the thermal gradient plate
nightTL	Average diurnal temperature at the bottom left side of the thermal gradient plate
nightTR	Average diurnal temperature at the bottom left side of the thermal gradient plate
petri	Number of Petri dishes in a column or a row.
method	Leave blank to use average corner temperature values or use "precise" to create a temperature gradient based in individual corner temperatures
adjust	adjust temperature to center of Petri dish
toplot	Decides between plotting average Petri dish temperature (="average") or fluctuation (="fluctuation")

Value

A graph with average Petri dish temperature, temperature fluctuation or germination

Examples

data<-tg_example
plot_results(data,0,1,39,40,1,39,3,38,petri=13,method="precise",adjust=TRUE,toplot = "nighttemp")
plot_results(data,5,8,39,40,1,39,3,38,petri=13,adjust=TRUE,toplot = "fluctuation")

pgomba/thermgRad documentation built on Sept. 4, 2022, 8:15 a.m.