fitstats_optim: Goodness-of-fit Statistics

Description Usage Arguments Value

View source: R/fitstats_optim.R

Description

I based this function on "fitstats()" from https://github.com/rbchan/unmarked/blob/master/R/boot.R It's a function returning three goodness-of-fit statistics - sum-of-squares, Chi-squared, and the Freeman-Tukey test-statistic - calculated using my optim estimates rather than a model fit in "unmarked".

Usage

1
fitstats_optim(optim_out, n_obs, y_obs = NA, W, sampling_method)

Arguments

n_obs

vector of observations at each site & replicate

y_obs

matrix of the number of observations in each distance category (from formatted unmarked data). Only used if sampling_method = "distance"

W

transect half-width (in meters)

sampling_method

either "pointcount" or "distance"

out

fit from optim

Value

vector of 3 fit statistics


philipshirk/nmmsims documentation built on Feb. 26, 2020, 11:27 a.m.