In philliplab/MotifBinner2: Processes NGS Primer ID Datasets

opts_chunk$set(echo=FALSE)
opts_chunk$set(warning=FALSE)
opts_chunk$set(fig.pos = 'H')

library(MotifBinner2)

if (!exists('result'))
{
  result <- all_results[[grep('alignBinsMSA', names(all_results))[1]]]
}
if (class(result) != 'alignBinsMSA')
{
  result <- all_results[[grep('alignBinsMSA', names(all_results))[1]]]
}

r result$config$op_full_name

Aligns a set of reads (should be merged reads) using default mafft settings.

kable_summary(result$summary)

timingTable(result)

cat('\n\n---\n\n')

philliplab/MotifBinner2 documentation built on Sept. 8, 2020, 12:09 a.m.