Man pages for philliplab/hypermutR
Detects hypermutation in DNA
| ancestor_processing | Resolve the ancestor argument of remove_hypermut |
| consensusMatrix_seqinr | Computes a consensus matrix. |
| convert_alignment_to_matrix | Converts an alignment to a matrix |
| deduplicate_seqs | Deduplicates sequence data |
| hd_seqs | High diversity sequence sample |
| ld_seqs | Low diversity sequence sample |
| make_list_SeqFastadna | Formats character vector as seqinr::read.fasta |
| rcpp_scan_seq | Wrapper for C++ implementation of scan_seq |
| remove_hypermut | Detect and process hypermutated sequences |
| restart_r | Restart R |
| scan_seq | Sequence scanner |
| sim_hyper | Simulates hypermutation in sequence datasets |
