Man pages for philliplab/hypermutR
Detects hypermutation in DNA

ancestor_processingResolve the ancestor argument of remove_hypermut
consensusMatrix_seqinrComputes a consensus matrix.
convert_alignment_to_matrixConverts an alignment to a matrix
deduplicate_seqsDeduplicates sequence data
hd_seqsHigh diversity sequence sample
ld_seqsLow diversity sequence sample
make_list_SeqFastadnaFormats character vector as seqinr::read.fasta
rcpp_scan_seqWrapper for C++ implementation of scan_seq
remove_hypermutDetect and process hypermutated sequences
restart_rRestart R
scan_seqSequence scanner
sim_hyperSimulates hypermutation in sequence datasets
philliplab/hypermutR documentation built on May 25, 2019, 2:21 p.m.