tests/testthat/_snaps/check_package_parameters.md

In piavat/PRE2DUP-R: Package for PRE2DUP-R method

check_package_parameters notices missing arguments

Code
  check_package_parameters(dt = df_pack_params, pack_atc = "ATC", pack_id = "vnr",
    pack_ddd_low = "lower_ddd", pack_dur_min = "minimum_duration",
    pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration",
    return_data = TRUE)
Condition
  Error:
  ! argument 'pack_ddd_usual' is missing from function call.

Code
  check_package_parameters(dt = df_pack_params, pack_id = "vnr", pack_ddd_low = "lower_ddd",
    pack_dur_min = "minimum_duration", pack_dur_usual = "usual_duration",
    pack_dur_max = "maximum_duration", return_data = TRUE)
Condition
  Error:
  ! arguments 'pack_atc', 'pack_ddd_usual' are missing from function call.

check_package_parameters notices the columns that are missing

Code
  check_package_parameters(df_pack_params[, -1], pack_atc = "ATC", pack_id = "vnr",
  pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd", pack_dur_min = "minimum_duration",
  pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration")
Condition
  Error:
  ! column 'ATC' is missing from the dataset.

Code
  check_package_parameters(df_pack_params[, -c(1, 5)], pack_atc = "ATC", pack_id = "vnr",
  pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd", pack_dur_min = "minimum_duration",
  pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration")
Condition
  Error:
  ! columns 'ATC', 'minimum_duration' are missing from the dataset.

check_package_parameters warns if durations or DDD limits are in wrong order

Code
  check_package_parameters(dt = df_pack_params, pack_atc = "ATC", pack_id = "vnr",
    pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd_error", pack_dur_min = "minimum_duration",
    pack_dur_usual = "usual_duration_error", pack_dur_max = "maximum_duration")
Message
  Column 'vnr' has invalid or missing values in 1 rows: 2
  Columns 'minimum_duration', 'usual_duration_error', 'maximum_duration' has values are in wrong order in 2 rows: 4, 5
  Columns 'lower_ddd', 'usual_ddd_error' has values are in wrong order in 3 rows: 1, 3, 4
Condition
  Error:
  ! Errors in dataset assigned to 'df_pack_params'. See listing above for details.

check_package_parameters warns if duplicated package parameters are found

Code
  check_package_parameters(dt = df_pack_params, pack_atc = "ATC", pack_id = "vnr",
    pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd", pack_dur_min = "minimum_duration",
    pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration")
Message
  'vnr' has duplicated values
Condition
  Error:
  ! Errors in dataset assigned to 'df_pack_params'. See listing above for details.

check_package_parameters warns if there are no records in parameter file

Code
  check_package_parameters(dt = df_pack_params_empty, pack_atc = "ATC", pack_id = "vnr",
    pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd", pack_dur_min = "minimum_duration",
    pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration")
Condition
  Error:
  ! No data in the dataset 'df_pack_params_empty'.

check_package_parameters informs that data has passed check

Code
  check_package_parameters(dt = df_pack_params, pack_atc = "ATC", pack_id = "vnr",
    pack_ddd_low = "lower_ddd", pack_ddd_usual = "usual_ddd", pack_dur_min = "minimum_duration",
    pack_dur_usual = "usual_duration", pack_dur_max = "maximum_duration")
Message
  Checks passed for 'df_pack_params'

piavat/PRE2DUP-R documentation built on June 11, 2025, 11:42 a.m.