Man pages for pierucci/heemod
Markov Models for Health Economic Evaluations

acceptability_curve	Acceptability Curve from Probabilistic Analysis
add_hazards	Add Hazards
apply_af	Apply an Acceleration Factor
apply_hr	Apply a Hazard Ratio
apply_or	Apply an Odds Ratio
apply_shift	Apply a time shift to a survival distribution
as_expr_list	Convert Lazy Dots to Expression List
calc_prob_from_surv	Calculate Probability of Event
calc_surv_from_prob	Calculate Probability of Survival
calibrate_model	Calibrate Model Parameters
check_cycle_inputs	Check Cycle and Time Inputs
check_matrix	Check Markov Model Transition Matrix
check_names	Check Names
check_states	Check Model States for Consistency
check_strategy_index	Check Strategy Index
clean_factors	Convert Data Frame Factor Variables to Character
cluster	Run 'heemod' on a Cluster
combine_models	Combine Multiple Models
combine_probs	Combine Probabilities
compute_counts	Compute Count of Individual in Each State per Cycle
compute_icer	Compute ICER
compute_surv	Evaluate Survival Distributions
compute_values	Compute State Values per Cycle
construct_part_surv_tib	construct a survival object from tabular specification
create_demographic_table	Read a Demographic Table
create_df_from_tabular	Load Data From a Folder Into an Environment
create_matrix_from_tabular	Create a Transition Matrix From Tabular Input
create_model_from_tabular	Create a 'heemod' Model From Tabular Files Info
create_model_list_from_tabular	Read Models Specified by Files
create_options_from_tabular	Create Model Options From a Tabular Input
create_parameters_from_tabular	Create a Parameter Definition From Tabular Input
create_states_from_tabular	Create State Definitions From Tabular Input
define_calibration_fn	Define Calibration Function
define_correlation	Define a Correlation Structure for Probabilistic Uncertainty...
define_dsa	Define a Sensitivity Analysis
define_inflow	Define Inflow for a BIA
define_init	Define Initial Counts
define_parameters	Define Markov Model Parameters
define_part_surv	Define Partitioned Survival
define_psa	Define Parameters Distribution for Probabilistic Analysis
define_spline_survival	Define a Restricted Cubic Spline Survival Distribution
define_starting_values	Define Starting State Values
define_state	Define a Markov Model State
define_state_list	Define Markov Model State List
define_strategy	Define a Markov Model
define_survival	Define a Survival Distribution
define_surv_table	Define a survival distribution based on explicit survival...
define_transition	Define Transition Matrix for Markov Model
discount	Discount a Quantity Over Time
discount_hack	Hack to Work Around a Discounting Issue
dispatch_strategy	Dispatch Values According to Strategy
dispatch_strategy_hack	Hack to Automate Use of Strategy Name
distributions	Probability Density Functions for Probabilistic Uncertainty...
eval_models_from_tabular	Evaluate Models From a Tabular Source
eval_parameters	Evaluate Markov model parameters
eval_resample	Evaluate Resampling Definition
eval_state_list	Evaluate Markov Model States
eval_strategy	Evaluate Strategy
eval_strategy_newdata	Iteratively Evaluate a Markov Model With New Parameter Values
eval_surv	Evaluate Survival Distributions
eval_transition	Evaluate Markov Model Transition Matrix
expand_if_necessary	Expand States and Transition
expand_state	Expand Time-Dependant States into Tunnel States
export_savi	Export PSA Results for SAVI
extract_params	Extract Evaluated Parameters
extract_strata	Extract Product-Limit Tables
extract_stratum	Extract Product-Limit Table for a Stratum
file-checkers	Check File Type
filter_blanks	Remove Blank Rows From Table
gather_model_info	Gather Information for Running a Model From Tabular Data
get_counts	Get State Membership Counts
get_counts_diff	Get count matrix and difference between two cycles
get_frontier	Return Efficiency Frontier
get_matrix_order	Return Markov Model Transition Matrix Order
get_mat_total	Get count number
get_parameter_names	Return parameters names
get_state_names	Get State Names
get_state_number	Return Number of State
get_state_value_names	Return Names of State Values
get_transition	Get Markov Model Transition Matrix
get_values	Get Strategy Values
heemod	Markov Models for Health Economic Evaluations
heemod_scale	Normalize Cost and Effect
insert	Insert Elements in Vector
interpolate	Interpolate Lazy Dots
is.wholenumber	Check Wholenumbers
join	Project Beyond a Survival Distribution with Another
list_all_same	Check if All the Elements of a List Are the Same
load_surv_models	Load a set of survival fits
look_up	Look Up Values in a Data Frame
make_names	Make Syntactically Valid Names
mix	Mix Two or More Survival Distributions
modify	Modify Object
parse_multi_spec	Specify Inputs for Multiple Models From a Single File
part_survs_from_surv_inputs	Convert saved fits to partitioned survival objects
plot.dsa	Plot Sensitivity Analysis
plot.psa	Plot Results of Probabilistic Analysis
plot.run_model	Plot Results of a Markov Model
plot.surv_obj	Plot general survival models
plur	Returns "s" if x > 1
probability	Convenience Functions to Compute Probabilities
project_fn	Project Beyond a Survival Distribution with Another...
read_file	Read the accepted file formats for tabular input
reexports	Objects exported from other packages
reindent_transition	Reindent Transition Matrix
rescale_discount_rate	Rescale Discount Rate
run_bcea	Use the BCEA package
run_dsa	Run Sensitivity Analysis
run_model	Run Markov Model
run_model_tabular	Run Analyses From Files
run_psa	Run Probabilistic Uncertainty Analysis
safe_conversion	Safely Convert From Characters to Numbers
save_outputs	Save Model Outputs
set_covariates	Set Covariates of a Survival Distribution
summary.run_model	Summarise Markov Model Results
summary.surv_shift	Summarize surv_shift objects
update_model	Run Model on New Data
who_mortality	Use WHO Mortality Rate
wtd_summary	Weighted Summary