ploidyverse/ploidyverseClasses: S4 Classes Shared among ploidyverse Packages

The 'ploidyverse' is a group of R packages for the analysis of genetic data from diploid, polyploid, and mixed-ploidy samples using standardized input and output formats. The 'ploidyverseClasses' package defines S4 classes extending the collapsedVcf class from 'VariantAnnotation', in order to facilitate import and export of data among 'ploidyverse' packages and between the 'ploidyverse' and other software. A file format specification is also included, describing requirements and general advice for VCF files in the 'ploidyverse'.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0
URL https://github.com/ploidyverse/ploidyverseClasses
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ploidyverse/ploidyverseClasses")
ploidyverse/ploidyverseClasses documentation built on Nov. 9, 2018, 12:19 p.m.