API for ploidyverse/ploidyverseClasses
Accessors and Utilities for VCFs in the Ploidyverse
| Global functions | |
|---|---|
| .checkvalid | Source code |
| acn_to_geno | Source code |
| alleleCopy | Man page Source code |
| array3D_to_matrixList | Man page Source code |
| dDirichletMultinom | Man page Source code |
| dmultinom | Man page Source code |
| enumerateGenotypes | Man page Source code |
| genoConvMat | Man page Source code |
| genotypeFromIndex | Man page Source code |
| genotypeStrings | Man page Source code |
| indexGenotype | Man page Source code |
| makeGametes | Man page Source code |
| markValidity | Man page |
| markValidity,VCF-method | Man page |
| matrixList_to_array3D | Man page Source code |
| nGen | Man page Source code |
| sampleinfo | Man page |
| sampleinfo,VCF-method | Man page |
| sampleinfo<- | Man page |
| sampleinfo<-,VCF-method | Man page |
| selfingMatrix | Man page Source code |
| software | Man page |
| software,VCF-method | Man page |
| software<- | Man page |
| software<-,VCF-method | Man page |
| validPloidyverseVCF_Archival | Man page |
| validPloidyverseVCF_Archival,VCF-method | Man page |
| validPloidyverseVCF_Postcall | Man page |
| validPloidyverseVCF_Postcall,VCF-method | Man page |
| validPloidyverseVCF_Precall | Man page |
| validPloidyverseVCF_Precall,VCF-method | Man page |
