dot-normalizeEachSpectrum_dt: Normalize a mzDt by seqNum
In pmbrophy/mzDataTable: Import and convert raw mass spectrometry data formats
Description
Usage
Arguments
Details
Value
Description
Normalize intensity of each individual spectrum in the mzDt.
Usage
1
.normalizeEachSpectrum_dt(mzDt, method)
Arguments
mzDt
the mzDt to be normalized in place
method
"maxPeak", "sum", or "sqrt"
Details
"maxPeak": divide intensity of each spectrum by the max intensity.
"sqrt": divide intensity of each spectrum using sqrt intensity transform.
"sum" : divide intensity of each spectrum by sum intensity of the spectrum.
Value
returns mzDt with extra column 'intensity_norm'
pmbrophy/mzDataTable documentation built on June 6, 2020, 7:43 a.m.
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Description Usage Arguments Details Value
Description
Normalize intensity of each individual spectrum in the mzDt.
Usage
1 | .normalizeEachSpectrum_dt(mzDt, method)
|
Arguments
mzDt |
the mzDt to be normalized in place |
method |
"maxPeak", "sum", or "sqrt" |
Details
"maxPeak": divide intensity of each spectrum by the max intensity. "sqrt": divide intensity of each spectrum using sqrt intensity transform. "sum" : divide intensity of each spectrum by sum intensity of the spectrum.
Value
returns mzDt with extra column 'intensity_norm'
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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