Files in pmckenz1/biogeography
Reconstructing ancestral ranges using a phylogeny and two data matrices

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/box_movement_method.R R/conv_sdm_rasters_threshold.R R/get_prob_matrix.R R/ignore/astrocaryum_working_file.R R/ignore/get_discrete_species_mat.R R/ignore/get_land_matrix.R R/ignore/pedic_example.R R/ignore/running_movement_astrocaryum.R R/ignore/simple_biogeography_model.R R/ignore/simple_prob_model.R R/moving_box_approx.R R/sdm_function.R collecting_inputs_example.pdf
data/Astrocaryum_BI_T49478.nex
data/Astrocaryum_M10730.nex
data/Astrocaryum_MP_T49477.nex
data/Astrocaryum_dated_tree_in_BEAST.nex
data/pruned_dated_tree.nex
inst/alphapoint2betapoint8_ancABCDE.csv
inst/alphapoint2betapoint8_ancBC.csv
inst/alphapoint2betapoint8_ancBCDE.csv
inst/alphapoint2betapoint8_ancDE.csv
inst/alphapoint5betapoint5_ancABCDE.csv
inst/alphapoint5betapoint5_ancBC.csv
inst/alphapoint5betapoint5_ancBCDE.csv
inst/alphapoint5betapoint5_ancDE.csv
inst/alphapoint8betapoint2_ancABCDE.csv
inst/alphapoint8betapoint2_ancBC.csv
inst/alphapoint8betapoint2_ancBCDE.csv
inst/alphapoint8betapoint2_ancDE.csv
inst/bibliography.bib
inst/citations/ree_2008.txt
inst/final_project.pdf
inst/heterogeneous_ancABCDE.csv
inst/heterogeneous_ancBC.csv
inst/heterogeneous_ancBCDE.csv
inst/heterogeneous_ancDE.csv
inst/homogeneous_ancABCDE.csv
inst/homogeneous_ancBC.csv
inst/homogeneous_ancBCDE.csv
inst/homogeneous_ancED.csv
inst/speciesA.csv
inst/speciesB.csv
inst/speciesC.csv
inst/speciesD.csv
inst/speciesE.csv
inst/trig_ancABCDE.csv
inst/trig_ancBC.csv
inst/trig_ancBCDE.csv
inst/trig_ancDE.csv
inst/working_draft.Rmd
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matrixranger.Rproj
maxent.jar
pmckenz1/biogeography documentation built on Aug. 2, 2017, 11:36 p.m.