The mcpdiversity package
provides tools for making maximum coverage selections based on:
1) alpha and beta diversity values, and 2) presence/absence matrices
I built these tools for my undergraduate thesis, where I want to tie ecological properties of sites (useful for predicting alpha diversity within sites and beta diversity between sites) to selections made in a maximum coverage problem.
Given a presence/absence table that tells which species are within which sites, what is the best way to pick X number of sites so that we include the most species?
Alpha and beta diversity values for sites can be predicted by the ecological properties of those sites. This package presents tools for making maximum coverage selections based on alpha and beta diversity values alone.
produce_presabs_matrix()
compute_rwr()
opt_across_sites_df()
simulate_presabs_matrix()
make_shared_sp_matrix()
sample_newrow_presabls()
produce_presabs_matrix()
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