getLQ: Get precomputed matrix for fast NPA computations
In pmpsa-hpc/NPAModels: Contains utils for loading and manipulating two-layers structure network models

Get precomputed matrix for fast NPA computations

1	getLQ(Model, verbose = TRUE, pattern.gene = "^EXP\\(")

`Model`	A R list object with slot model containing nodes and edges data.frame
`verbose`	A logical. Default is `TRUE`, messages will be displayed during the function execution
`pattern.gene`	A character vector. Regular expression for filtering downstrean genes

A R list object with computed metric like L2, L3 matrices, Qbackbone, ...

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data(Hs__CFA__Apoptosis__0__0__1)
# Hs__CFA__Apoptosis__0__0__1 <- getLQ(
#    Hs__CFA__Apoptosis__0__0__1, verbose = TRUE)

pmpsa-hpc/NPAModels documentation built on Feb. 13, 2021, 7:03 a.m.

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