API for pneuvial/adjclust
Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix

Global functions
adjClust Man page Source code
adjClust.dgCMatrix Source code
adjClust.dgTMatrix Source code
adjClust.dgeMatrix Source code
adjClust.dist Source code
adjClust.dsCMatrix Source code
adjClust.dsTMatrix Source code
adjClust.dsyMatrix Source code
adjClust.matrix Source code
alt.as.dendrogram Source code
alt.plot Source code
alt.plotNode Source code
as.hclust.chac Man page Source code
buildHeap Source code
chac Man page
checkCondition Source code
correct Man page Source code
correct.chac Man page Source code
cutree_chac Man page Source code
cuttree_chac Man page
dendro_for_mode Source code
diagnose Man page Source code
diagnose.chac Man page Source code
head.chac Man page Source code
hicClust Man page Source code
hicClust.HTCexp Source code
hicClust.Matrix Source code
hicClust.character Source code
hicClust.data.frame Source code
hicClust.dgCMatrix Source code
hicClust.dgeMatrix Source code
hicClust.dsCMatrix Source code
hicClust.matrix Source code
make_coords Source code
matL Source code
matL_full Source code
matL_full_rowCumsums Source code
matL_sparse Source code
matL_sparse_rowCumsums Source code
matR Source code
matR_full Source code
matR_full_rowCumsums Source code
matR_sparse Source code
matR_sparse_rowCumsums Source code
plot.chac Man page Source code
plotSim Man page Source code
plotSim.HTCexp Source code
plotSim.SnpMatrix Source code
plotSim.default Source code
plotSim.dgCMatrix Source code
plotSim.dist Source code
plotSim.dsCMatrix Source code
poly_coords_default Source code
poly_coords_dsCMatrix Source code
poly_coords_sparse Source code
print.chac Man page Source code
rescale_coords Source code
run.adjclust Source code
run.hicclust Source code
run.snpClust Source code
select Man page Source code
select.chac Man page Source code
snpClust Man page Source code
snpClust.dgCMatrix Source code
snpClust.dsCMatrix Source code
snpClust.matrix Source code
snpClust.snpStats Source code
summary.chac Man page Source code
take_bottomleft Source code
update_call Source code
pneuvial/adjclust documentation built on Oct. 13, 2024, 7:59 a.m.