c3co-data: Data for the 'c3co' Package

#' segment,GSE22928,MM,LAU108EBV
#'
#' dataset containing the output of PSCBS package
#'
#' @name segment,GSE22928,MM,LAU108EBV
#' @format A list with 5 components:
#' \describe{
#'   \item{data}{PairedPSCNData}
#'   \item{output}{PairedPSCNSegments}
#'   \item{tcnSegRows}{Segments of TCN}
#'   \item{dhSegRows}{Segments of dh}
#'   \item{params}{parameters for segmentation}
#'   ...
#' }
#' @source \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22928}
NULL

#' segment,GSE22928,MM,LAU108Me246
#'
#' dataset containing the output of PSCBS package
#'
#' @name segment,GSE22928,MM,LAU108Me246
#' @format A list with 5 components:
#' \describe{
#'   \item{data}{PairedPSCNData}
#'   \item{output}{PairedPSCNSegments}
#'   \item{tcnSegRows}{Segments of TCN}
#'   \item{dhSegRows}{Segments of dh}
#'   \item{params}{parameters for segmentation}
#'   ...
#' }
#' @source \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22928}
NULL


#' segment,GSE22928,MM,LAU108PBK
#'
#' dataset containing the output of PSCBS package
#'
#' @name segment,GSE22928,MM,LAU108PBK
#' @format A list with 5 components:
#' \describe{
#'   \item{data}{PairedPSCNData}
#'   \item{output}{PairedPSCNSegments}
#'   \item{tcnSegRows}{Segments of TCN}
#'   \item{dhSegRows}{Segments of dh}
#'   \item{params}{parameters for segmentation}
#'   ...
#' }
#' @source \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22928}
NULL

#' segment,GSE22928,MM,LAU149PBL
#'
#' dataset containing the output of PSCBS package
#'
#' @name segment,GSE22928,MM,LAU149PBL
#' @format A list with 5 components:
#' \describe{
#'   \item{data}{PairedPSCNData}
#'   \item{output}{PairedPSCNSegments}
#'   \item{tcnSegRows}{Segments of TCN}
#'   \item{dhSegRows}{Segments of dh}
#'   \item{params}{parameters for segmentation}
#'   ...
#' }
#' @source \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22928}
NULL

#' segment,GSE22928,MM,LAU149T149D
#'
#' dataset containing the output of PSCBS package
#'
#' @name segment,GSE22928,MM,LAU149T149D
#' @format A list with 5 components:
#' \describe{
#'   \item{data}{PairedPSCNData}
#'   \item{output}{PairedPSCNSegments}
#'   \item{tcnSegRows}{Segments of TCN}
#'   \item{dhSegRows}{Segments of dh}
#'   \item{params}{parameters for segmentation}
#'   ...
#' }
#' @source \url{https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22928}
NULL

#' segDat-RK29
#'
#' dataset containing the segmentation of data for patient RK29
#' 
#' @name segDat-RK29
#' @format A list with 4 components
#' \describe{
#'   \item{bkp}{List of breakpoints}
#'   \item{Y1}{Segmented Minor copy number}
#'   \item{Y2}{Segmented Major copy number}
#'   \item{Y}{Segmented Total copy number}
#'   ...
#' }
#' 
NULL

#' resC3CO-RK29
#'
#' dataset containing the output of C3CO method on patient RK29 samples from GSE47077 dataset
#'
#' @name resC3CO-RK29
#' @format A c3coFit object from package c3co
#' \describe{
#'   \item{bkp}{breakpoints}
#'   \item{segDat}{Segmented data}
#'   \item{fit}{Results of c3co for each number of feature}
#'   ...
#' }
#' 
NULL