Files in pnojai/rwalk
Random Walk Model of Neurotransmitter Release and Uptake
.Rbuildignore
.gitignore
DESCRIPTION
Dev/coord_dev.R
Dev/correct_conc_dev.R
Dev/current_conversion_dev.R
Dev/examine_gap_analysis_diff.R
Dev/fit.R
Dev/fit.csv
Dev/fit_dev.R
Dev/fit_multi.R
Dev/merge_files_dev.R
Dev/peak_dev.R
Dev/plot_comparison_AMPH_multi.R
Dev/plot_comparison_dev.R
Dev/plot_comparison_multi.R
Dev/plot_dev.R
Dev/preprocess_dev.R
Dev/rsquared_dev.R
Dev/rwalk_demo.R
Dev/rwalk_old.R
Dev/set_fit_boundaries_dev.R
Dev/split_dev.R
Dev/split_files_manual.R
Docs/PresentationNotes.org
Docs/RWalk_Requirements.org
Docs/optimization.txt
LICENSE
LICENSE.md
NAMESPACE
Plots/plot_comparison.R
Plots/plot_comparison_AMPH.R
Plots/plot_comparison_No_AMPH.R
Plots/plot_comparison_best_fit.R
Plots/plot_comparison_best_fit_lab_pres.R
Plots/plot_comparison_first_last.R
Plots/plot_comparison_lab_pres.R
Plots/plot_comparison_saline.R
Plots/plot_comparison_saline_control.R
Plots/plot_control_all.R
Plots/plot_simulation.R
R/preprocess.R
R/rwalk.R
README.Rmd
README.md
Simulations/PoreModelSulzer.xls
Simulations/RW DA diffusion in striatum.xlsx
Simulations/RW_AMP.xls
Simulations/RW_AMP_corrected.xls
Simulations/RW_CV.xlsx
Simulations/RW_CV_corrected.xlsx
Simulations/RW_CV_jiggletest.xlsx
man/compare_pulse.Rd
man/compare_pulse_args_df.Rd
man/current_to_concentration.Rd
man/electrode_pos.Rd
man/electrode_results.Rd
man/get_best_args.Rd
man/get_slope_intercepts.Rd
man/iteration_duration.Rd
man/micmen.Rd
man/plot_rwalk_compare.Rd
man/plot_rwalk_sim.Rd
man/read_experiment_csv.Rd
man/rwalk_cv_pulse.Rd
man/slope_intercept_df.Rd
rwalk.Rproj
scripts/convert_files.R
scripts/cv_analysis.R
scripts/data_quality_review.R
scripts/explore.R
scripts/file_params.xlsx
scripts/file_params_wip.xlsx
scripts/means.R
scripts/merge_analysis.Rmd
scripts/merge_files.R
scripts/merge_files_mahas_june_analysis.R
scripts/merge_files_mahas_june_analysis_yint.R
scripts/merge_files_prep.R
scripts/merge_igor_files.R
scripts/plot_3_stims.R
scripts/plot_files_param.R
scripts/plot_files_param_inter.R
scripts/plot_multiple_animals.R
scripts/plot_sweeps.R
scripts/ratios_and_thalf.R
scripts/rwalk_cv_demo.R
scripts/split_files_param.R
scripts/stim_df_analysis.R
scripts/stim_df_analysis_wightman_demo.R
scripts/stim_df_dead_space.R
scripts/stim_df_dead_space_avg.R
scripts/stim_df_dead_space_avg2.R
scripts/stim_df_dead_space_avg_by_animal.R
scripts/stim_df_dead_space_loop.R
tests/testdata/180430_DA_saline_1.csv
tests/testdata/181015_10mg-kgAMPH_50mM_Nimo_2_1st_stim.csv
tests/testdata/181015_10mg-kgAMPH_50mM_Nimo_2_outlier_scrub.csv
tests/testdata/1902052_a-synKO_AMPH4_CURR10400_CONC5_FILE1.xlsx
tests/testdata/1902052_a-synKO_AMPH4_CURR10400_CONC5_FILE1_peakdetection.xlsx
tests/testdata/190205_a-synKO_AMPH1.xlsx
tests/testdata/190205_a-synKO_AMPH2.xlsx
tests/testdata/RW_CV.xlsx
tests/testdata/RW_CV_corrected.xlsx
tests/testdata/RW_CV_corrected2.xlsx
tests/testdata/ScrubbingLog.csv
tests/testdata/ScrubbingLog_Short.csv
tests/testdata/ScrubbingLog_Short_TargetNames.csv
tests/testthat.R
tests/testthat/Rplots.pdf
tests/testthat/dev_wait_test-copyfile.R
tests/testthat/test-examples.R
tests/testthat/test-fit.R
tests/testthat/test-get_fit_boundaries.R
tests/testthat/test-plot-scripts.R
tests/testthat/test-preprocess.R
tests/testthat/test-rwalk.R
tests/testthat/test-sample-simulations.R
tests/testthat/test-split.R
