NEWS.md

In poissonconsulting/mcmcr: Manipulate MCMC Samples

mcmcr 0.6.1.9002

• Provide soft deprecated message on breaking change.

mcmcr 0.6.1.9001

• When bound = TRUE rhat() now also returns rhat values for separate analyses.

• When bound = TRUE and as_df = TRUE rhat() now returns a data.frame with the rhat values for the separate and combined analyses.

• Merge pull request #52 from poissonconsulting/description-contr.

add contributors

• Merge pull request #50 from poissonconsulting/rcmd-check.

update rcmd check and documentation

• Merge pull request #49 from poissonconsulting/changes_to_actions.

Made changes to Actions using UsePois and Files were created

mcmcr 0.6.1.9000

• Same as previous version.

mcmcr 0.6.1

• Update testing to testthat 3.

mcmcr 0.6.0

• Added fill_na() for mcarray, mcmcarray and mcmcr.
• Fixed as.mcmcarray.mcmc() (and as.mcmcr.mcmc()) so now returns an mcmcarray (and mcmcr) object with no terms.

mcmcr 0.5.0

• Added
• tidy.mcmcr().
• simplify = FALSE argument to coef() and tidy() and soft-deprecated if not TRUE.
• ... optional arguments for fun = median argument to estimates().
• Moved as_nlists.mcmc.list() to nlist package.

mcmcr 0.4.0

• Added as_mcmc_list.mcmr().
• Moved the following to nlist
• as_nlist.mcmc() and as_nlist.mcmc.list()
• as_nlists.mcmc()
• as.term.mcmc() and as.term.mcmc.list()
• bind_iterations.mcmc() and bind_iterations.mcmc.list()
• collapse_chains.default() and collapse_chains.mcmc.list()

mcmcr 0.3.0

• Changed
• npdims.mcmc.list() to return character vector (as opposed to list)
• collapse_chains.mcmc.list() to return an mcmc.list object with one chain (as opposed to an mcmc object)
• first argument of estimates() from object to x.
• scalar_only = FALSE argument of pars() to scalar = NA.

• estimates() so now checks fun returns scalar numeric.

• Soft-deprecated

• pvalue() for extras::pvalue().
• zero() for fill_all().
• check_mcmcarray() and check_mcmcr() for chk_mcmcarray() and chk_mcmcr().
• iterations argument with iters in subset().

• parameters argument with pars in subset().

• Added

• vld_() and chk_() functions for mcmcarray and mcmcr objects.
• scalar = NULL argument to pars() and npars().
• na_rm = NA argument to esr() and rhat().
• missing as_df = FALSE arg to esr() for mcarray, mcmc and mcmc.list.

• coercion to and from nlists objects for mcmcr, mcmc.list and mcmc objects.

• Moved

• handling of terms to term package.
• generic definitions of nchains(), niters(), collapse_chains() and split_chains() etc to universals package.

mcmcr 0.2.0

• Added check_mcmcr() and check_mcmcarray().
• Fixed by and as_df arguments in converged().
• Added more tests.
• Removed as.mcmc.mcmc.list(), thin.mcmc() and thin.mcmc.list() as now defined by coda.
• No longer export as.mcmc.list.mcarray() as clashes with rjags version.

mcmcr 0.1.0

• Added mcmc_aperm() function to transpose parameter dimensions.
• Added npdims() function to get number of parameter dimensions.
• Added by = TRUE argument to mcmc_map() function.
• Removed tibble package from suggests.
• rhat() now returns minimum of 1.
• Defined subset() and parameters() for mcmcrs object.
• Added bound = FALSE argument to rhat.mcmcrs() and converged.mcmcrs() functions.

mcmcr 0.0.3

• Moved graphics, coef, tibble packages from imports to suggests.
• Replaced internal error() with err::err().

mcmcr 0.0.2

• Allowed NAs in values to calculate pvalues.
• Updated to not use length argument in checkr as deprecated.

mcmcr 0.0.1

• Released to CRAN.

poissonconsulting/mcmcr documentation built on Jan. 18, 2024, 1:11 a.m.