tests/testthat/_snaps/populations.md

In poissonconsulting/ypr: Yield Per Recruit

ypr_populations works

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations creates an population with 2 elements

tmax:  20
k:     0.15
Linf:  1, 2
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations creates populations with 1 element when parameters same if expand

tmax:  20
k:     0.15
Linf:  1
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations creates populations with 2 elements even when parameters same if not expand

tmax:  20
k:     0.15
Linf:  1
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations make unique names for duplicates when not expand

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    2.5, 4.6, 2.5
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations names when not expand preserves order

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    60, 50, 50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    2.5, 4.6, 2.5
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations names when expand reorders

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50, 50, 60, 60
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    2.5, 4.6, 2.5, 4.6
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations make unique names for duplicates even with multiple parameters when not expand

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    60, 50, 60
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    2.5, 4.6, 2.5
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations but works when different length parameters if expand

tmax:  20
k:     0.1, 0.2, 0.3
Linf:  1
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations creates 2 populations when 2 parameters are provided

tmax:  20
k:     0.15
Linf:  1, 2
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

ypr_populations creates 2 populations when 3 parameters are provided and not expand

tmax:  20
k:     0.15
Linf:  1, 2
t0:    0
k2:    0.15, 0.25
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   2, 1

ypr_populations creates 8 populations when 3 parameters are provided and expand

tmax:  20
k:     0.15
Linf:  1, 2, 1, 2, 1, 2, 1, 2
t0:    0
k2:    0.15, 0.15, 0.25, 0.25, 0.15, 0.15, 0.25, 0.25
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  1
Wa:    0.01
fa:    1
q:     0.1
RPR:   1, 1, 1, 1, 2, 2, 2, 2

as_ypr_populations works if sr values are not the same

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1, 2
BH:    1, 0
Rk:    10, 20
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   0
Lup:   1000
Nc:    0
pi:    0.2
rho:   0
Hm:    0
Rmax:  2, 3
Wa:    0.01
fa:    1
q:     0.1
RPR:   1

as_ypr_populations works if fishery values are not the same

tmax:  20
k:     0.15
Linf:  100
t0:    0
k2:    0.15
Linf2: 100
L2:    1000
Wb:    3
Ls:    50
Sp:    100
es:    1
Sm:    0
fb:    1
tR:    1
BH:    1
Rk:    3
n:     0.2
nL:    0.2
Ln:    1000
Lv:    50
Vp:    100
Llo:   10, 100
Lup:   10, 100
Nc:    0, 1
pi:    0.1, 0.2
rho:   0, 1
Hm:    0, 1
Rmax:  1
Wa:    0.01
fa:    1
q:     0, 1
RPR:   1

poissonconsulting/ypr documentation built on April 4, 2023, 8:35 p.m.