create_signature_sample_vector: Create signature sample vector

In popopo19/excerno: Fillter out somatic mutations generated by the Formalin-Fixed Paraffin-Embedded (FFPE) tissue preservation technique from cancer tissue

Create signature sample vector

Description

Simulate sample to match signature distribution (vector of all mutations)

Usage

create_signature_sample_vector(signature, num.mut = 100)

Arguments

signature	A signature matrix
num.mut	Number of mutations generated

Value

A vector of type character

Examples

library(MutationalPatterns)
library(tidyverse)

# Load signature from COSMIC
cosmic.sigs <- get_known_signatures()
cosmic.sig4 <- as.matrix(cosmic.sigs[,4])

# Create vector
create_signature_sample_vector(cosmic.sig4, 100)

popopo19/excerno documentation built on Aug. 28, 2022, 1:23 a.m.