In predomics/predomicspkg: Interpretable Prediction in Omics Data

Installation

Follow these steps to install the Predomics package:

1. Install R from CRAN.
2. Install the predomics package along with all its dependencies : doSNOW, foreach, snow, doRNG, gtools, glmnet, pROC, viridis, kernlab, randomForest,effsize

devtools::install_github("predomics/predomicspkg", dependencies = TRUE)

## install dependencies
# install.packages(c("doSNOW", "foreach", "snow", "doRNG", "gtools", "glmnet", "pROC", "viridis", "kernlab", "randomForest","effsize"))
# if (!requireNamespace("BiocManager", quietly = TRUE))
#     install.packages("BiocManager")
# BiocManager::install("BioQC")
# install.packages("testthat")
# install.packages("roxygen2")

Once eveything is installed un the check ...

predomics/predomicspkg documentation built on Dec. 11, 2024, 11:06 a.m.