obesity: Obesity (frequencies) from the MetaHIT study
In predomics/predomicspkg: Interpretable Prediction in Omics Data
obesity R Documentation
Obesity (frequencies) from the MetaHIT study
Description
This dataset consists of frequency abundance files as downloaded from http://waldronlab.io/curatedMetagenomicData/
This is a list containing two elements: (i) the X data matrix with 1045 species and 292 observations and (ii) patient class = -1 (n=167) and healthy controls (n=96).
Caution, this dataset has also a class 0 with overweight patients, which needs to be omited from both X and y
Author(s)
Le Chatelier, Emmanuelle, Trine Nielsen, Junjie Qin, Edi Prifti, Falk Hildebrand, Gwen Falony, Mathieu Almeida, et al “Richness of human gut microbiome correlates with metabolic markers.” Nature 500, no. 7464 (April 9, 2014): 541–546.
predomics/predomicspkg documentation built on Dec. 11, 2024, 11:06 a.m.
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| obesity | R Documentation |
Obesity (frequencies) from the MetaHIT study
Description
This dataset consists of frequency abundance files as downloaded from http://waldronlab.io/curatedMetagenomicData/ This is a list containing two elements: (i) the X data matrix with 1045 species and 292 observations and (ii) patient class = -1 (n=167) and healthy controls (n=96). Caution, this dataset has also a class 0 with overweight patients, which needs to be omited from both X and y
Author(s)
Le Chatelier, Emmanuelle, Trine Nielsen, Junjie Qin, Edi Prifti, Falk Hildebrand, Gwen Falony, Mathieu Almeida, et al “Richness of human gut microbiome correlates with metabolic markers.” Nature 500, no. 7464 (April 9, 2014): 541–546.
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