calc.sqldata.cor: Calculate Pearson Correlation Matrix Between Seasons

In predsci/DICE: DICE: Dynamics of Interacting Community Epidemics

Description

calc.sqldata.cor Calculates an nyears by nyears correlation matrix for dengue incidence

Usage

calc.sqldata.cor(mydata = NULL, all_years_epi = NULL, cases = NULL,
  nfit = NULL)

Arguments

mydata	A dataframe with all the available data for this DICE run
all_years_epi	the epi data for all years
cases	AN array with the entire time series of incidence
nfit	The number of data points used when calculating the correlation

Value

corrMAT An nyear x nyears matrix with the Pearson correlation values

Examples

calc.cor(mydata= mydata, all_years_epi = al_years_epi, cases = all_years_epi$model$epi, nfit = nfit)
calc.cor(mydata= mydata, all_years_epi = al_years_epi, cases = all_years_epi$fit$epi[,iregion], nfit = nfit)

predsci/DICE documentation built on Aug. 9, 2019, 9:41 a.m.