Description Fields Methods Examples
Compute dynamic swath windows
masses
MS1 masses
breaks
the breaks
nbins
number of bins
digits
mass accuracy in result
asTable(overlap = 1)
make windows
error()
show error
optimizeWindows(digits = 1, maxbin = 15, plot = FALSE, overlap = 0)
optimizes the windows
quantile_breaks(digits = 2)
same number of MS1 in each window but might violate hard constraints
sampling_breaks(maxwindow = 150, minwindow = 5, digits = 2,
plot = FALSE)
starts with quantile breaks but mixes with uniform data to satisfy had constraints
showCycle(overlap = 1)
shows the generated DIA cycle
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