Files in pspc-data-science/branchsim

Gamma negative binomial branching process simulation of epidemics

R/CMJ-functions.R R/CMJ-plotting-functions.R R/branchsim-package.R R/path-functions.R R/plotting-functions.R R/sim-functions.R R/utility-functions.R man/G.Rd man/add_layer.Rd man/as_tidygraph.Rd man/asymptotic_plot.Rd man/average_component_size.Rd man/branchsim-package.Rd man/build_tree.Rd man/calc_R0.Rd man/calc_avg_path.Rd man/calc_mu.Rd man/char_function.Rd man/component_size_plot.Rd man/dMu.Rd man/derivative_generating_function.Rd man/equalize_paths.Rd man/extinct_plot.Rd man/find_gamma_parameters.Rd man/find_kappa.Rd man/find_p.Rd man/find_p_from_quantile.Rd man/generating_function.Rd man/get_extinct_prob.Rd man/get_malthusian.Rd man/make_first_layer.Rd man/plot_R0.Rd man/plot_dendrogram.Rd man/plot_exp.Rd man/plot_gamma.Rd man/plot_gamma_dist.Rd man/plot_log.Rd man/plot_paths.Rd man/plot_single_mother_dist.Rd man/plot_single_path.Rd man/prob_distribution_2.Rd man/renewal_function.Rd man/renewal_plot.Rd man/run_sims.Rd man/single_mother_distribution.Rd man/treelist_to_paths.Rd