Files in pujana-lab/systematicQTL
Pipeline to run sistematically QTL analysis
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/QtlWrapper.R
R/build_cross2_dataset.R
R/build_genescan_plot.R
R/build_pdx_plot.R
R/find_peaks.R
R/lod.R
R/set_empirical_significance_lod.R
R/set_significance_lod.R
R/to_csvs_geno.R
R/write_csvs_geno.R
README.md
man/QtlWrapper-class.Rd
man/QtlWrapper.Rd
man/build_cross2_dataset.Rd
man/build_genescan_plot-QtlWrapper-method.Rd
man/build_genescan_plot.Rd
man/build_pdx_plot-QtlWrapper-method.Rd
man/build_pdx_plot.Rd
man/find_peaks-QtlWrapper-method.Rd
man/find_peaks.Rd
man/lod-QtlWrapper-method.Rd
man/lod.Rd
man/set_empirical_significance_lod-QtlWrapper-method.Rd
man/set_empirical_significance_lod.Rd
man/set_significance_lod-QtlWrapper-method.Rd
man/set_significance_lod.Rd
man/to_csvs_geno.Rd
man/write_csvs_geno.Rd
systematicQTL.Rproj
tests/testthat.R
tests/testthat/generate_random_ds.R
tests/testthat/load_cross.R
tests/testthat/random.genotypes.csvs
tests/testthat/random.pheno.csv
tests/testthat/test-QtlWrapper.R
tests/testthat/test-build_cross2_dataset.R
tests/testthat/test-find_peaks.R
tests/testthat/test-lod.R
tests/testthat/test-to_csvs_geno.R
tests/testthat/test_set_empirical_significante_lod,R.R
tests/testthat/test_set_significance_lod,R.R
vignettes/.gitignore
vignettes/systematic-qtl.Rmd
