create_bac | Creation of "PhageSim" dataset for bacteria |
create_pha | Creation of "PhageSim" dataset for phage |
move_any | Movement of bacteria or phage |
mutate_bac | Mutation of bacteria |
place_any | Placement of bacteria or phage |
plot_all | Plots the bacteria and phage |
rep_bac | Replication of bacteria |
set_params | Create the transmission kernel parameters |
update_all | Update bacteria infections by phage |
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