Files in quon-titative-biology/bfa
A dimensionality reduction tool using gene detection pattern to mitigate noisy expression profile of scRNA-seq
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/BFA.R
R/data.R
R/diagnose.R
R/simulation.R
README.md
data/celltype.rda
data/celltype_toy.rda
data/disperPlot.rda
data/exprdata.rda
data/zinb_toy.rda
man/BinaryPCA.Rd
man/InitBinaryFA.Rd
man/OptimBFA.Rd
man/celltype.Rd
man/celltype_toy.Rd
man/diagnose.Rd
man/disperPlot.Rd
man/exprdata.Rd
man/getGeneExpr.Rd
man/getLoading.Rd
man/getScore.Rd
man/gradient.Rd
man/gradient_chunk.Rd
man/neg_loglikelihood.Rd
man/neg_loglikelihood_chunk.Rd
man/restore.Rd
man/scNoiseSim.Rd
man/scbfa.Rd
man/zinb_toy.Rd
tests/testthat.R
tests/testthat/test-bfa.R
tests/testthat/test-scBFA.R
vignettes/.gitignore
vignettes/vignette.Rmd
