Man pages for r-glennie/CTMCdive
Fit Continuous-time Markov chain to observed dive and surface durations
| AIC0.CTMCdive | Akaike's An Information Criterion for CTMCdive models |
| AIC.CTMCdive | Akaike's An Information Criterion for CTMCdive models |
| AIC.CTMCdiveList | Akaike's An Information Criterion for lists of CTMCdive... |
| EDF_f | EDF for smooth terms = trace(F) |
| ExpandCovs | Expand covariates across a time grid |
| FitCTMCdive | Fits continuous-time Markov chain to dive and surface... |
| for2char | Formala translated to a character Borrow from formula.tools... |
| GetExposureEff | Get exposure effect on predicted durations |
| GetExposureEffonIntensity | Estimate exposure effect for dive and surface intensity |
| get_samples | internal function to get posterior samples |
| logLik.CTMCdive | Returns log-likelihood with degrees of freedom |
| MakeMatrices | Compute matrices required to fit the model |
| plot.CTMCdive | Plot fitted CTMCdive model |
| plotExposureEffect | Plot exposure effect |
| predict.CTMCdive | Predict mean duration from fitted CTMC model for dives and... |
| pred_mat_maker | construct predictor matrix |
| simulateCTMC2 | Simulate CTMCdive data |
| simulateCTMCziph | Simulate CTMCdive data for Ziphius data |
| summary.CTMCdive | Print summary of CTMCdive x |
| update.CTMCdive | Add or remove terms from a CTMC model and fit the new model |
